IL_8BH4_033
3D structure
- PDB id
- 8BH4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 8BH4|1|0|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BH4_033 not in the Motif Atlas
- Homologous match to IL_7A0S_033
- Geometric discrepancy: 0.1048
- The information below is about IL_7A0S_033
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
8BH4|1|0|C|998
8BH4|1|0|U|999
8BH4|1|0|A|1000
8BH4|1|0|A|1001
8BH4|1|0|G|1002
*
8BH4|1|0|C|1153
8BH4|1|0|G|1154
8BH4|1|0|A|1155
8BH4|1|0|A|1156
8BH4|1|0|G|1157
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain 1
- 5S ribosomal RNA; 5S rRNA
- Chain N
- 50S ribosomal protein L20
- Chain O
- 50S ribosomal protein L21
- Chain W
- 50S ribosomal protein L30
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