IL_8BHF_245

3D structure

PDB id

8BHF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

ACAG*CUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHF|1|A3|A|1291
8BHF|1|A3|C|1292
8BHF|1|A3|A|1293
8BHF|1|A3|G|1294
*
8BHF|1|A3|C|1305
8BHF|1|A3|U|1306
8BHF|1|A3|U|1307
8BHF|1|A3|U|1308

Current chains

Chain A3

18S ribosomal RNA

Nearby chains

Chain e3

40S ribosomal protein S29

Chain g3

Ubiquitin-40S ribosomal protein S27a