IL_8BHF_299

3D structure

PDB id

8BHF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAGGC*GCCGCCGGUGAAAUAC

Length

22 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHF|1|A2|G|3965
8BHF|1|A2|G|3966
8BHF|1|A2|A|3967
8BHF|1|A2|G|3968
8BHF|1|A2|G|3969
8BHF|1|A2|C|3970
*
8BHF|1|A2|G|4030
8BHF|1|A2|C|4031
8BHF|1|A2|C|4032
8BHF|1|A2|G|4033
8BHF|1|A2|C|4034
8BHF|1|A2|C|4035
8BHF|1|A2|G|4036
8BHF|1|A2|G|4037
8BHF|1|A2|U|4038
8BHF|1|A2|G|4039
8BHF|1|A2|A|4040
8BHF|1|A2|A|4041
8BHF|1|A2|A|4042
8BHF|1|A2|U|4043
8BHF|1|A2|A|4044
8BHF|1|A2|C|4045

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain l1

60S ribosomal protein L10a