IL_8BHJ_012
3D structure
- PDB id
- 8BHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.81 Å
Loop
- Sequence
- GAAC*GAGUGAAAAAGAAC
- Length
- 18 nucleotides
- Bulged bases
- 8BHJ|1|0|A|504, 8BHJ|1|0|A|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BHJ_012 not in the Motif Atlas
- Homologous match to IL_7RQB_014
- Geometric discrepancy: 0.1252
- The information below is about IL_7RQB_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60992.6
- Basepair signature
- cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L
- Number of instances in this motif group
- 6
Unit IDs
8BHJ|1|0|G|481
8BHJ|1|0|A|482
8BHJ|1|0|A|483
8BHJ|1|0|C|484
*
8BHJ|1|0|G|496
8BHJ|1|0|A|497
8BHJ|1|0|G|498
8BHJ|1|0|U|499
8BHJ|1|0|G|500
8BHJ|1|0|A|501
8BHJ|1|0|A|502
8BHJ|1|0|A|503
8BHJ|1|0|A|504
8BHJ|1|0|A|505
8BHJ|1|0|G|506
8BHJ|1|0|A|507
8BHJ|1|0|A|508
8BHJ|1|0|C|509
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain P
- 50S ribosomal protein L22
- Chain R
- 50S ribosomal protein L24
Coloring options: