IL_8BHJ_130
3D structure
- PDB id
- 8BHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.81 Å
Loop
- Sequence
- ACAAU*AU
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BHJ_130 not in the Motif Atlas
- Geometric match to IL_5J7L_018
- Geometric discrepancy: 0.1501
- The information below is about IL_5J7L_018
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_03109.3
- Basepair signature
- cWW-cWS-tWH-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
8BHJ|1|2|A|371
8BHJ|1|2|C|372
8BHJ|1|2|A|373
8BHJ|1|2|A|374
8BHJ|1|2|U|375
*
8BHJ|1|2|A|389
8BHJ|1|2|U|390
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain t
- 30S ribosomal protein S16
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