IL_8BHJ_174
3D structure
- PDB id
- 8BHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.81 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BHJ_174 not in the Motif Atlas
- Geometric match to IL_3C3Z_002
- Geometric discrepancy: 0.2928
- The information below is about IL_3C3Z_002
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_29925.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
8BHJ|1|2|C|1407
8BHJ|1|2|A|1408
8BHJ|1|2|C|1409
*
8BHJ|1|2|G|1491
8BHJ|1|2|A|1492
8BHJ|1|2|A|1493
8BHJ|1|2|G|1494
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain 0
- Large subunit ribosomal RNA; LSU rRNA
- Chain 3
- mRNA
- Chain 5
- Transfer RNA; tRNA
- Chain p
- 30S ribosomal protein S12
Coloring options: