IL_8BHJ_186
3D structure
- PDB id
- 8BHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.81 Å
Loop
- Sequence
- GCACUG*CAAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BHJ_186 not in the Motif Atlas
- Geometric match to IL_4V9F_035
- Geometric discrepancy: 0.2499
- The information below is about IL_4V9F_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06691.1
- Basepair signature
- cWW-cWS-L-R-L-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8BHJ|1|0|G|864
8BHJ|1|0|C|865
8BHJ|1|0|A|866
8BHJ|1|0|C|867
8BHJ|1|0|U|868
8BHJ|1|0|G|869
*
8BHJ|1|0|C|908
8BHJ|1|0|A|909
8BHJ|1|0|A|910
8BHJ|1|0|A|911
8BHJ|1|0|C|912
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain 1
- 5S ribosomal RNA; 5S rRNA
- Chain J
- 50S ribosomal protein L16
Coloring options: