3D structure

PDB id
8BHL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.21 Å

Loop

Sequence
UAG*CAAAA
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8BHL_010 not in the Motif Atlas
Homologous match to IL_5J7L_254
Geometric discrepancy: 0.1402
The information below is about IL_5J7L_254
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_69440.3
Basepair signature
cWW-L-R-cSH-cWW
Number of instances in this motif group
3

Unit IDs

8BHL|1|0|U|293
8BHL|1|0|A|294
8BHL|1|0|G|295
*
8BHL|1|0|C|343
8BHL|1|0|A|344
8BHL|1|0|A|345
8BHL|1|0|A|346
8BHL|1|0|A|347

Current chains

Chain 0
23S rRNA RRLG-RRNA

Nearby chains

Chain R
50S ribosomal protein L24

Coloring options:


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