IL_8BHL_182

3D structure

PDB id

8BHL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BHL_182 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.1303

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

8BHL|1|0|U|1851
8BHL|1|0|U|1852
8BHL|1|0|A|1853
8BHL|1|0|A|1854
8BHL|1|0|U|1855
8BHL|1|0|U|1856
8BHL|1|0|G|1857
8BHL|1|0|A|1858
8BHL|1|0|U|1859
8BHL|1|0|G|1860
*
8BHL|1|0|U|1882
8BHL|1|0|U|1883
8BHL|1|0|G|1884
8BHL|1|0|A|1885
8BHL|1|0|U|1886
8BHL|1|0|C|1887
8BHL|1|0|G|1888
8BHL|1|0|A|1889
8BHL|1|0|A|1890
8BHL|1|0|G|1891

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains