IL_8BHN_124
3D structure
- PDB id
- 8BHN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- GAUUAG*CGACGAUC
- Length
- 14 nucleotides
- Bulged bases
- 8BHN|1|2|U|244, 8BHN|1|2|C|280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BHN_124 not in the Motif Atlas
- Homologous match to IL_5J7L_014
- Geometric discrepancy: 0.1581
- The information below is about IL_5J7L_014
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_46174.3
- Basepair signature
- cWW-cSS-tSS-tSH-L-cWW-tHW-cWW
- Number of instances in this motif group
- 5
Unit IDs
8BHN|1|2|G|242
8BHN|1|2|A|243
8BHN|1|2|U|244
8BHN|1|2|U|245
8BHN|1|2|A|246
8BHN|1|2|G|247
*
8BHN|1|2|C|277
8BHN|1|2|G|278
8BHN|1|2|A|279
8BHN|1|2|C|280
8BHN|1|2|G|281
8BHN|1|2|A|282
8BHN|1|2|U|283
8BHN|1|2|C|284
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain p
- 30S ribosomal protein S12
- Chain u
- 30S ribosomal protein S17
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