IL_8BHP_097

3D structure

PDB id

8BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

UGUUC*GGUAG

Length

10 nucleotides

Bulged bases

8BHP|1|0|U|2689, 8BHP|1|0|U|2690

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BHP_097 not in the Motif Atlas

Homologous match to IL_4WF9_102

Geometric discrepancy: 0.1251

The information below is about IL_4WF9_102

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_23774.1

Basepair signature

cWW-L-R-L-tHS-cWW

Number of instances in this motif group

11

Unit IDs

8BHP|1|0|U|2687
8BHP|1|0|G|2688
8BHP|1|0|U|2689
8BHP|1|0|U|2690
8BHP|1|0|C|2691
*
8BHP|1|0|G|2718
8BHP|1|0|G|2719
8BHP|1|0|U|2720
8BHP|1|0|A|2721
8BHP|1|0|G|2722

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain B

50S ribosomal protein L3

Chain K

50S ribosomal protein L17

Chain M

50S ribosomal protein L19