IL_8BIL_177

3D structure

PDB id

8BIL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

UUAG*CAAAAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BIL_177 not in the Motif Atlas

Homologous match to IL_7A0S_008

Geometric discrepancy: 0.5799

The information below is about IL_7A0S_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15067.1

Basepair signature

cWW-L-R-L-R-L-cWW-L

Number of instances in this motif group

4

Unit IDs

8BIL|1|0|U|292
8BIL|1|0|U|293
8BIL|1|0|A|294
8BIL|1|0|G|295
*
8BIL|1|0|C|343
8BIL|1|0|A|344
8BIL|1|0|A|345
8BIL|1|0|A|346
8BIL|1|0|A|347
8BIL|1|0|A|348

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain R

50S ribosomal protein L24