IL_8BIL_179

3D structure

PDB id

8BIL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

GGGG*CUUAC

Length

9 nucleotides

Bulged bases

8BIL|1|0|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BIL_179 not in the Motif Atlas

Geometric match to IL_4EYA_008

Geometric discrepancy: 0.3054

The information below is about IL_4EYA_008

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_15225.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

8BIL|1|0|G|880
8BIL|1|0|G|881
8BIL|1|0|G|882
8BIL|1|0|G|883
*
8BIL|1|0|C|893
8BIL|1|0|U|894
8BIL|1|0|U|895
8BIL|1|0|A|896
8BIL|1|0|C|897

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains