IL_8BIL_182

3D structure

PDB id

8BIL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BIL_182 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.1225

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

8BIL|1|0|U|1851
8BIL|1|0|U|1852
8BIL|1|0|A|1853
8BIL|1|0|A|1854
8BIL|1|0|U|1855
8BIL|1|0|U|1856
8BIL|1|0|G|1857
8BIL|1|0|A|1858
8BIL|1|0|U|1859
8BIL|1|0|G|1860
*
8BIL|1|0|U|1882
8BIL|1|0|U|1883
8BIL|1|0|G|1884
8BIL|1|0|A|1885
8BIL|1|0|U|1886
8BIL|1|0|C|1887
8BIL|1|0|G|1888
8BIL|1|0|A|1889
8BIL|1|0|A|1890
8BIL|1|0|G|1891

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains