IL_8BIM_156
3D structure
- PDB id
- 8BIM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.04 Å
Loop
- Sequence
- CUGCAU*AUGG
- Length
- 10 nucleotides
- Bulged bases
- 8BIM|1|2|C|1054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BIM_156 not in the Motif Atlas
- Geometric match to IL_4V88_473
- Geometric discrepancy: 0.3391
- The information below is about IL_4V88_473
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
8BIM|1|2|C|1051
8BIM|1|2|U|1052
8BIM|1|2|G|1053
8BIM|1|2|C|1054
8BIM|1|2|A|1055
8BIM|1|2|U|1056
*
8BIM|1|2|A|1204
8BIM|1|2|U|1205
8BIM|1|2|G|1206
8BIM|1|2|G|1207
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain 3
- mRNA
- Chain g
- 30S ribosomal protein S3
- Chain n
- 30S ribosomal protein S10
- Chain r
- 30S ribosomal protein S14
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