IL_8BIP_133
3D structure
- PDB id
- 8BIP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUG*CUUA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BIP_133 not in the Motif Atlas
- Homologous match to IL_8C3A_135
- Geometric discrepancy: 0.1613
- The information below is about IL_8C3A_135
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
8BIP|1|1|U|3300
8BIP|1|1|U|3301
8BIP|1|1|U|3302
8BIP|1|1|G|3303
*
8BIP|1|1|C|3311
8BIP|1|1|U|3312
8BIP|1|1|U|3313
8BIP|1|1|A|3314
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain LP
- 60S ribosomal protein L17-A
- Chain Ld
- 60S ribosomal protein L31-A
Coloring options: