IL_8BN3_202

3D structure

PDB id

8BN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S, ES7s delta, eIF5A, Stm1 containing

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

ACA*UUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BN3_202 not in the Motif Atlas

Homologous match to IL_4V88_448

Geometric discrepancy: 0.3001

The information below is about IL_4V88_448

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_30342.2

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

10

Unit IDs

8BN3|1|2|A|1221
8BN3|1|2|C|1222
8BN3|1|2|A|1223
*
8BN3|1|2|U|1236
8BN3|1|2|U|1237
8BN3|1|2|U|1238

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain C5

RPS15 isoform 1

Chain E1

RPS31 isoform 1