IL_8BN3_210

3D structure

PDB id

8BN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S, ES7s delta, eIF5A, Stm1 containing

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AAUA*UUCU

Length

8 nucleotides

Bulged bases

8BN3|1|2|A|1333, 8BN3|1|2|U|1334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BN3_210 not in the Motif Atlas

Homologous match to IL_8C3A_462

Geometric discrepancy: 0.1368

The information below is about IL_8C3A_462

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25234.1

Basepair signature

cWW-cSH-L-cWW

Number of instances in this motif group

2

Unit IDs

8BN3|1|2|A|1332
8BN3|1|2|A|1333
8BN3|1|2|U|1334
8BN3|1|2|A|1335
*
8BN3|1|2|U|1364
8BN3|1|2|U|1365
8BN3|1|2|C|1366
8BN3|1|2|U|1367

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain C6

40S ribosomal protein S16-A

Chain D0

RPS20 isoform 1