IL_8BPO_024

3D structure

PDB id

8BPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 (TTC5) and S-phase Cyclin A Associated Protein residing in the ER (SCAPER)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

8BPO|1|A1|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BPO|1|A1|A|466
8BPO|1|A1|U|467
8BPO|1|A1|U|468
8BPO|1|A1|C|469
8BPO|1|A1|A|470
8BPO|1|A1|A|471
8BPO|1|A1|C|472
*
8BPO|1|A1|G|682
8BPO|1|A1|C|683
8BPO|1|A1|G|684
8BPO|1|A1|C|685
8BPO|1|A1|A|686
8BPO|1|A1|U|687
8BPO|1|A1|U|688
8BPO|1|A1|U|689

Current chains

Chain A1

28S ribosomal RNA

Nearby chains

Chain E2

60S ribosomal protein L6

Chain p2

60S ribosomal protein L28