IL_8BQD_143

3D structure

PDB id

8BQD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome in complex with Map1 (conformation 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUGGCC*GGAAUC

Length

12 nucleotides

Bulged bases

8BQD|1|BQ|G|1236

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BQD|1|BQ|G|1234
8BQD|1|BQ|U|1235
8BQD|1|BQ|G|1236
8BQD|1|BQ|G|1237
8BQD|1|BQ|C|1238
8BQD|1|BQ|C|1239
*
8BQD|1|BQ|G|1249
8BQD|1|BQ|G|1250
8BQD|1|BQ|A|1251
8BQD|1|BQ|A|1252
8BQD|1|BQ|U|1253
8BQD|1|BQ|C|1254

Current chains

Chain BQ

25S rRNA

Nearby chains