IL_8BQX_058

3D structure

PDB id

8BQX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome in complex with Map1 (conformation 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AUAAGGA*UUU

Length

10 nucleotides

Bulged bases

8BQX|1|2|G|1228

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BQX|1|2|A|1224
8BQX|1|2|U|1225
8BQX|1|2|A|1226
8BQX|1|2|A|1227
8BQX|1|2|G|1228
8BQX|1|2|G|1229
8BQX|1|2|A|1230
*
8BQX|1|2|U|1257
8BQX|1|2|U|1258
8BQX|1|2|U|1259

Current chains

Chain 2

18S rRNA

Nearby chains

Chain C

40S ribosomal protein S10-A

Chain D

40S ribosomal protein S12

Chain N

40S ribosomal protein S31