IL_8BQX_102
3D structure
- PDB id
- 8BQX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome in complex with Map1 (conformation 2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUU*AC
- Length
- 5 nucleotides
- Bulged bases
- 8BQX|1|BQ|U|190
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BQX_102 not in the Motif Atlas
- Homologous match to IL_8C3A_013
- Geometric discrepancy: 0.0834
- The information below is about IL_8C3A_013
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
8BQX|1|BQ|G|189
8BQX|1|BQ|U|190
8BQX|1|BQ|U|191
*
8BQX|1|BQ|A|204
8BQX|1|BQ|C|205
Current chains
- Chain BQ
- 25S rRNA
Nearby chains
- Chain AK
- 60S ribosomal protein L26-A
- Chain BE
- 60S ribosomal protein L4-A
Coloring options: