IL_8BQX_126

3D structure

PDB id

8BQX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome in complex with Map1 (conformation 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGUAUC*GAAG

Length

10 nucleotides

Bulged bases

8BQX|1|BQ|U|981, 8BQX|1|BQ|A|1103

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BQX|1|BQ|C|977
8BQX|1|BQ|G|978
8BQX|1|BQ|U|979
8BQX|1|BQ|A|980
8BQX|1|BQ|U|981
8BQX|1|BQ|C|982
*
8BQX|1|BQ|G|1101
8BQX|1|BQ|A|1102
8BQX|1|BQ|A|1103
8BQX|1|BQ|G|1104

Current chains

Chain BQ

25S rRNA

Nearby chains

Chain AV

60S ribosomal protein L29

Chain BB

60S ribosomal protein L18-A

Chain BO

60S ribosomal protein L7-A