IL_8BQX_170

3D structure

PDB id

8BQX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome in complex with Map1 (conformation 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAGCCU*GGUC

Length

10 nucleotides

Bulged bases

8BQX|1|BQ|A|1962, 8BQX|1|BQ|G|1963

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BQX|1|BQ|G|1961
8BQX|1|BQ|A|1962
8BQX|1|BQ|G|1963
8BQX|1|BQ|C|1964
8BQX|1|BQ|C|1965
8BQX|1|BQ|U|1966
*
8BQX|1|BQ|G|2057
8BQX|1|BQ|G|2058
8BQX|1|BQ|U|2059
8BQX|1|BQ|C|2080

Current chains

Chain BQ

25S rRNA

Nearby chains