IL_8BR8_019

3D structure

PDB id

8BR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state (A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

CCCGAG*CGCGG

Length

11 nucleotides

Bulged bases

8BR8|1|Lt|C|429

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BR8|1|Lt|C|427
8BR8|1|Lt|C|428
8BR8|1|Lt|C|429
8BR8|1|Lt|G|430
8BR8|1|Lt|A|431
8BR8|1|Lt|G|432
*
8BR8|1|Lt|C|441
8BR8|1|Lt|G|442
8BR8|1|Lt|C|443
8BR8|1|Lt|G|444
8BR8|1|Lt|G|445

Current chains

Chain Lt

Large Subunit rRNA

Nearby chains

Chain LC

Ribosomal protein L4

Chain LM

60S ribosomal protein L13

Chain LO

Ribosomal protein L15

Chain LR

Ribosomal protein L18

Chain Lb

Ribosomal protein L27a