IL_8BR8_079

3D structure

PDB id

8BR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state (A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

GGCGCAGCGCAC*GAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BR8|1|Lt|G|1939
8BR8|1|Lt|G|1940
8BR8|1|Lt|C|1941
8BR8|1|Lt|G|1942
8BR8|1|Lt|C|1943
8BR8|1|Lt|A|1944
8BR8|1|Lt|G|1945
8BR8|1|Lt|C|1946
8BR8|1|Lt|G|1947
8BR8|1|Lt|C|1948
8BR8|1|Lt|A|1949
8BR8|1|Lt|C|1950
*
8BR8|1|Lt|G|1979
8BR8|1|Lt|A|1980
8BR8|1|Lt|C|1981

Current chains

Chain Lt

Large Subunit rRNA

Nearby chains

Chain Ln

Ribosomal protein L10a

Chain Lu

Transfer RNA; tRNA