IL_8BR8_189

3D structure

PDB id

8BR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state (A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

CGGAGGACC*GCGAUCG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BR8|1|St|C|967
8BR8|1|St|G|968
8BR8|1|St|G|969
8BR8|1|St|A|970
8BR8|1|St|G|971
8BR8|1|St|G|972
8BR8|1|St|A|973
8BR8|1|St|C|974
8BR8|1|St|C|975
*
8BR8|1|St|G|995
8BR8|1|St|C|996
8BR8|1|St|G|997
8BR8|1|St|A|998
8BR8|1|St|U|999
8BR8|1|St|C|1000
8BR8|1|St|G|1001

Current chains

Chain St

Small Subunit rRNA

Nearby chains

Chain SL

Ribosomal protein S10B

Chain Sh

Ribosomal protein S29A