IL_8BTK_177
3D structure
- PDB id
- 8BTK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the TRAP complex with the Sec translocon and a translating ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUCUU*AAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BTK_177 not in the Motif Atlas
- Homologous match to IL_8GLP_296
- Geometric discrepancy: 0.2399
- The information below is about IL_8GLP_296
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8BTK|1|B5|G|1692
8BTK|1|B5|U|1693
8BTK|1|B5|C|1694
8BTK|1|B5|U|1695
8BTK|1|B5|U|1696
*
8BTK|1|B5|A|1714
8BTK|1|B5|A|1715
8BTK|1|B5|C|1716
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BD
- Ribosomal_L18_c domain-containing protein
- Chain BI
- Ribosomal protein L10
Coloring options: