IL_8BTK_302
3D structure
- PDB id
- 8BTK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the TRAP complex with the Sec translocon and a translating ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UAAU*AUCGA
- Length
- 9 nucleotides
- Bulged bases
- 8BTK|1|B8|G|94
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BTK_302 not in the Motif Atlas
- Geometric match to IL_3NPQ_006
- Geometric discrepancy: 0.381
- The information below is about IL_3NPQ_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65740.1
- Basepair signature
- cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
8BTK|1|B8|U|64
8BTK|1|B8|A|65
8BTK|1|B8|A|66
8BTK|1|B8|U|67
*
8BTK|1|B8|A|91
8BTK|1|B8|U|92
8BTK|1|B8|C|93
8BTK|1|B8|G|94
8BTK|1|B8|A|95
Current chains
- Chain B8
- 5.8S rRNA
Nearby chains
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
- Chain BY
- Ribosomal protein L26
- Chain Bh
- 60S ribosomal protein L35
- Chain Bj
- Ribosomal protein L37
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