IL_8BUU_089
3D structure
- PDB id
- 8BUU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ARE-ABCF VmlR2 bound to a 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUACAGGAUAG*CC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BUU_089 not in the Motif Atlas
- Homologous match to IL_3U4M_002
- Geometric discrepancy: 0.2031
- The information below is about IL_3U4M_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32056.1
- Basepair signature
- cWW-L-cWW-L-L-tWH-R-L-R-L
- Number of instances in this motif group
- 3
Unit IDs
8BUU|1|A|G|2139
8BUU|1|A|U|2140
8BUU|1|A|A|2141
8BUU|1|A|C|2142
8BUU|1|A|A|2143
8BUU|1|A|G|2144
8BUU|1|A|G|2145
8BUU|1|A|A|2146
8BUU|1|A|U|2147
8BUU|1|A|A|2148
8BUU|1|A|G|2149
*
8BUU|1|A|C|2207
8BUU|1|A|C|2208
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 9
- ExpZ
Coloring options: