IL_8BYV_056
3D structure
- PDB id
- 8BYV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Staphylococus aureus 30S-RbfA complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- UACAAAG*CAUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 8BYV|1|a|U|1297
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BYV_056 not in the Motif Atlas
- Homologous match to IL_5J7L_054
- Geometric discrepancy: 0.2511
- The information below is about IL_5J7L_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.2
- Basepair signature
- cWW-L-R-tWH-L-R-L-tWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8BYV|1|a|U|1258
8BYV|1|a|A|1259
8BYV|1|a|C|1260
8BYV|1|a|A|1261
8BYV|1|a|A|1262
8BYV|1|a|A|1263
8BYV|1|a|G|1264
*
8BYV|1|a|C|1295
8BYV|1|a|A|1296
8BYV|1|a|U|1297
8BYV|1|a|A|1298
8BYV|1|a|A|1299
8BYV|1|a|A|1300
8BYV|1|a|G|1301
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
Coloring options: