IL_8C00_026
3D structure
- PDB id
- 8C00 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Enp1TAP-S21_A population of yeast small ribosomal subunit precursors depleted of rpS21/eS21
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAG*CGAGGAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8C00_026 not in the Motif Atlas
- Homologous match to IL_8C3A_420
- Geometric discrepancy: 0.23
- The information below is about IL_8C3A_420
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14882.1
- Basepair signature
- cWW-tSH-L-cWW-L-L-R-L
- Number of instances in this motif group
- 1
Unit IDs
8C00|1|2|G|514
8C00|1|2|A|515
8C00|1|2|G|516
*
8C00|1|2|C|536
8C00|1|2|G|537
8C00|1|2|A|538
8C00|1|2|G|539
8C00|1|2|G|540
8C00|1|2|A|541
8C00|1|2|A|542
8C00|1|2|C|543
Current chains
- Chain 2
- 18S rRNA precursor
Nearby chains
- Chain W
- 40S ribosomal protein S9-A
- Chain g
- 40S ribosomal protein S30-A
- Chain t
- Ribosome biogenesis protein TSR1
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