IL_8C01_063

3D structure

PDB id

8C01 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Enp1TAP_A population of yeast small ribosomal subunit precursors

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAC*GAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8C01_063 not in the Motif Atlas

Geometric match to IL_4WF9_055

Geometric discrepancy: 0.2648

The information below is about IL_4WF9_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70707.3

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

70

Unit IDs

8C01|1|2|C|1339
8C01|1|2|A|1341
8C01|1|2|C|1342
*
8C01|1|2|G|1383
8C01|1|2|A|1384
8C01|1|2|G|1385

Current chains

Chain 2

18S rRNA precursor

Nearby chains

Chain F

40S ribosomal protein S16-A