IL_8C3A_012

3D structure

PDB id

8C3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ailanthone bound to the Candida albicans 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CU*AUG

Length

5 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76488.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

36

Unit IDs

8C3A|1|1|C|177
8C3A|1|1|U|178
*
8C3A|1|1|A|236
8C3A|1|1|U|237
8C3A|1|1|G|238

Current chains

Chain 1

25S

Nearby chains

Chain 4

5.8S ribosomal RNA; 5.8S rRNA

Chain AI

Ribosomal protein L29

Chain AK

60S ribosomal protein L37-B

Chain BG

60S ribosomal protein L13

Chain t

60S ribosomal protein L13