IL_8C3A_206
3D structure
- PDB id
- 8C3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AUG*CU
- Length
- 5 nucleotides
- Bulged bases
- 8C3A|1|AS|U|1177
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8C3A_206 not in the Motif Atlas
- Homologous match to IL_8C3A_053
- Geometric discrepancy: 0.0441
- The information below is about IL_8C3A_053
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
8C3A|1|AS|A|1176
8C3A|1|AS|U|1177
8C3A|1|AS|G|1178
*
8C3A|1|AS|C|1320
8C3A|1|AS|U|1321
Current chains
- Chain AS
- 25S
Nearby chains
- Chain BB
- 60S ribosomal protein L7-A
- Chain BH
- 60S ribosomal protein L14-B
- Chain BJ
- Ribosomal protein L13
- Chain BN
- 60S ribosomal protein L20
- Chain CA
- 60S ribosomal protein L33-A
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