IL_8C3A_309
3D structure
- PDB id
- 8C3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UAUAAG*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8C3A_309 not in the Motif Atlas
- Homologous match to IL_8C3A_398
- Geometric discrepancy: 0.0845
- The information below is about IL_8C3A_398
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_34063.1
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8C3A|1|B|U|64
8C3A|1|B|A|65
8C3A|1|B|U|66
8C3A|1|B|A|67
8C3A|1|B|A|68
8C3A|1|B|G|69
*
8C3A|1|B|U|82
8C3A|1|B|G|83
8C3A|1|B|A|84
8C3A|1|B|A|85
8C3A|1|B|A|86
Current chains
- Chain B
- 18S
Nearby chains
- Chain 7
- 60S ribosomal protein L24-A
- Chain I
- 40S ribosomal protein S6
- Chain a
- 40S ribosomal protein S24
Coloring options: