IL_8C3A_314
3D structure
- PDB id
- 8C3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CCGU*AGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8C3A_314 not in the Motif Atlas
- Geometric match to IL_4WF9_109
- Geometric discrepancy: 0.2133
- The information below is about IL_4WF9_109
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_30621.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 66
Unit IDs
8C3A|1|B|C|147
8C3A|1|B|C|148
8C3A|1|B|G|149
8C3A|1|B|U|150
*
8C3A|1|B|A|160
8C3A|1|B|G|161
8C3A|1|B|A|162
8C3A|1|B|G|163
Current chains
- Chain B
- 18S
Nearby chains
- Chain 7
- 60S ribosomal protein L24-A
- Chain I
- 40S ribosomal protein S6
- Chain a
- 40S ribosomal protein S24
Coloring options: