IL_8C3A_367
3D structure
- PDB id
- 8C3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 8C3A|1|B|C|1259
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8C3A_367 not in the Motif Atlas
- Geometric match to IL_4LFB_044
- Geometric discrepancy: 0.1115
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_82453.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
8C3A|1|B|U|1257
8C3A|1|B|G|1258
8C3A|1|B|C|1259
8C3A|1|B|A|1260
8C3A|1|B|U|1261
*
8C3A|1|B|A|1422
8C3A|1|B|U|1423
8C3A|1|B|G|1424
Current chains
- Chain B
- 18S
Nearby chains
- Chain F
- Ribosomal protein S3
- Chain M
- 40S ribosomal protein S10-A
- Chain W
- Ribosomal protein S10
- Chain f
- 40S ribosomal protein S29A
- Chain i
- 60S ribosomal protein CAALFM_C304810CA
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