IL_8C3A_490

3D structure

PDB id

8C3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ailanthone bound to the Candida albicans 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUGAAUG*CGCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C3A|1|AS|C|2182
8C3A|1|AS|U|2183
8C3A|1|AS|G|2184
8C3A|1|AS|A|2185
8C3A|1|AS|A|2186
8C3A|1|AS|U|2187
8C3A|1|AS|G|2188
*
8C3A|1|AS|C|2213
8C3A|1|AS|G|2214
8C3A|1|AS|C|2215
8C3A|1|AS|G|2216

Current chains

Chain AS

25S

Nearby chains

Chain AW

60S ribosomal protein L2-B

Chain CM

Small subunit ribosomal RNA; SSU rRNA