Loop IL_8C3A

3D structure

PDB id: 8C3A (explore in PDB, NAKB, or RNA 3D Hub)
Description: Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å

Loop

Sequence: UGGAGGGUGUAGAAUAAGUGGGAG*CGCCGGUGAAAUACCACUACCUCUA
Length: 49 nucleotides
Bulged bases: 8C3A|1|AS|U|2438, 8C3A|1|AS|G|2441, 8C3A|1|AS|U|2442, 8C3A|1|AS|A|2472, 8C3A|1|AS|C|2476, 8C3A|1|AS|U|2477
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

8C3A|1|AS|U|2424
8C3A|1|AS|G|2425
8C3A|1|AS|G|2426
8C3A|1|AS|A|2427
8C3A|1|AS|G|2428
8C3A|1|AS|G|2429
8C3A|1|AS|G|2430
8C3A|1|AS|U|2431
8C3A|1|AS|G|2432
8C3A|1|AS|U|2433
8C3A|1|AS|A|2434
8C3A|1|AS|G|2435
8C3A|1|AS|A|2436
8C3A|1|AS|A|2437
8C3A|1|AS|U|2438
8C3A|1|AS|A|2439
8C3A|1|AS|A|2440
8C3A|1|AS|G|2441
8C3A|1|AS|U|2442
8C3A|1|AS|G|2443
8C3A|1|AS|G|2444
8C3A|1|AS|G|2445
8C3A|1|AS|A|2446
8C3A|1|AS|G|2447
*
8C3A|1|AS|C|2454
8C3A|1|AS|G|2455
8C3A|1|AS|C|2456
8C3A|1|AS|C|2457
8C3A|1|AS|G|2458
8C3A|1|AS|G|2459
8C3A|1|AS|U|2460
8C3A|1|AS|G|2461
8C3A|1|AS|A|2462
8C3A|1|AS|A|2463
8C3A|1|AS|A|2464
8C3A|1|AS|U|2465
8C3A|1|AS|A|2466
8C3A|1|AS|C|2467
8C3A|1|AS|C|2468
8C3A|1|AS|A|2469
8C3A|1|AS|C|2470
8C3A|1|AS|U|2471
8C3A|1|AS|A|2472
8C3A|1|AS|C|2473
8C3A|1|AS|C|2474
8C3A|1|AS|U|2475
8C3A|1|AS|C|2476
8C3A|1|AS|U|2477
8C3A|1|AS|A|2478

Current chains

Chain AS: 25S

Nearby chains

Chain CD: 60S ribosomal protein L36
Chain L1: Ribosomal protein

IL_8C3A_492