IL_8C3A_502
3D structure
- PDB id
- 8C3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGGCCGGUC*GCGUACUGGACCCA
- Length
- 23 nucleotides
- Bulged bases
- 8C3A|1|CM|C|670, 8C3A|1|CM|C|679
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_97218.1
- Basepair signature
- cWW-L-R-L-cSH-L-L-R-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 1
Unit IDs
8C3A|1|CM|U|648
8C3A|1|CM|G|649
8C3A|1|CM|G|650
8C3A|1|CM|C|651
8C3A|1|CM|C|652
8C3A|1|CM|G|653
8C3A|1|CM|G|654
8C3A|1|CM|U|655
8C3A|1|CM|C|656
*
8C3A|1|CM|G|669
8C3A|1|CM|C|670
8C3A|1|CM|G|671
8C3A|1|CM|U|672
8C3A|1|CM|A|673
8C3A|1|CM|C|674
8C3A|1|CM|U|675
8C3A|1|CM|G|676
8C3A|1|CM|G|677
8C3A|1|CM|A|678
8C3A|1|CM|C|679
8C3A|1|CM|C|680
8C3A|1|CM|C|681
8C3A|1|CM|A|682
Current chains
- Chain CM
- 18S
Nearby chains
- Chain CR
- 40S ribosomal protein S4
- Chain CW
- Ribosomal protein S4
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