IL_8C8Y_101
3D structure
- PDB id
- 8C8Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM captures early ribosome assembly in action
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- CUUG*CUGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8C8Y_101 not in the Motif Atlas
- Geometric match to IL_5TBW_129
- Geometric discrepancy: 0.3129
- The information below is about IL_5TBW_129
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
8C8Y|1|A|C|2084
8C8Y|1|A|U|2085
8C8Y|1|A|U|2086
8C8Y|1|A|G|2087
*
8C8Y|1|A|C|2232
8C8Y|1|A|U|2233
8C8Y|1|A|G|2234
8C8Y|1|A|G|2235
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain X
- 50S ribosomal protein L28
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