IL_8C90_085

3D structure

PDB id

8C90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

GGGG*CUC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8C90_085 not in the Motif Atlas

Geometric match to IL_4WSM_372

Geometric discrepancy: 0.3681

The information below is about IL_4WSM_372

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_09990.4

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

8C90|1|A|G|1421
8C90|1|A|G|1422
8C90|1|A|G|1423
8C90|1|A|G|1424
*
8C90|1|A|C|1575
8C90|1|A|U|1576
8C90|1|A|C|1577

Current chains

Chain A

23S rRNA

Nearby chains