IL_8C92_074

3D structure

PDB id

8C92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.79 Å

Loop

Sequence

UCCC*GGA

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8C92_074 not in the Motif Atlas

Geometric match to IL_8C3A_070

Geometric discrepancy: 0.398

The information below is about IL_8C3A_070

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15698.1

Basepair signature

cWW-tSH-cSH-cWW

Number of instances in this motif group

9

Unit IDs

8C92|1|A|U|1725
8C92|1|A|C|1726
8C92|1|A|C|1727
8C92|1|A|C|1728
*
8C92|1|A|G|1733
8C92|1|A|G|1734
8C92|1|A|A|1735

Current chains

Chain A

23S rRNA

Nearby chains