IL_8C94_032

3D structure

PDB id

8C94 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGAAAC*GGAUAACGGGGC

Length

19 nucleotides

Bulged bases

8C94|1|A|A|1134

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C94|1|A|G|1024
8C94|1|A|G|1025
8C94|1|A|G|1026
8C94|1|A|A|1027
8C94|1|A|A|1028
8C94|1|A|A|1029
8C94|1|A|C|1030
*
8C94|1|A|G|1124
8C94|1|A|G|1125
8C94|1|A|A|1126
8C94|1|A|U|1132
8C94|1|A|A|1133
8C94|1|A|A|1134
8C94|1|A|C|1135
8C94|1|A|G|1136
8C94|1|A|G|1137
8C94|1|A|G|1138
8C94|1|A|G|1139
8C94|1|A|C|1140

Current chains

Chain A

23S rRNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain J

50S ribosomal protein L13