IL_8C95_028
3D structure
- PDB id
- 8C95 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM captures early ribosome assembly in action
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.92 Å
Loop
- Sequence
- GUAAGC*GUAUC
- Length
- 11 nucleotides
- Bulged bases
- 8C95|1|A|A|1205
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8C95_028 not in the Motif Atlas
- Geometric match to IL_4V9F_056
- Geometric discrepancy: 0.3899
- The information below is about IL_4V9F_056
- Detailed Annotation
- tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_62654.1
- Basepair signature
- cWW-tSH-tHH-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
8C95|1|A|G|1202
8C95|1|A|U|1203
8C95|1|A|A|1204
8C95|1|A|A|1205
8C95|1|A|G|1206
8C95|1|A|C|1207
*
8C95|1|A|G|1239
8C95|1|A|U|1240
8C95|1|A|A|1241
8C95|1|A|U|1242
8C95|1|A|C|1243
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
Coloring options: