IL_8C95_031

3D structure

PDB id

8C95 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

4.92 Å

Loop

Sequence

UUC*GG

Length

5 nucleotides

Bulged bases

8C95|1|A|U|2402

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8C95_031 not in the Motif Atlas

Geometric match to IL_5LYS_008

Geometric discrepancy: 0.3891

The information below is about IL_5LYS_008

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

8C95|1|A|U|2401
8C95|1|A|U|2402
8C95|1|A|C|2403
*
8C95|1|A|G|2414
8C95|1|A|G|2415

Current chains

Chain A

23S rRNA

Nearby chains