3D structure

PDB id
8C9C (explore in PDB, NAKB, or RNA 3D Hub)
Description
Time limited cryo-EM reveals early ribosome assembly in action
Experimental method
ELECTRON MICROSCOPY
Resolution
6.62 Å

Loop

Sequence
CCUGAUC*GUGAG*G
Length
13 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8C9C|1|A|C|274
8C9C|1|A|C|275
8C9C|1|A|U|276
8C9C|1|A|G|277
8C9C|1|A|A|279
8C9C|1|A|U|280
8C9C|1|A|C|281
*
8C9C|1|A|G|359
8C9C|1|A|U|360
8C9C|1|A|G|361
8C9C|1|A|A|362
8C9C|1|A|G|363
*
8C9C|1|A|G|363

Current chains

Chain A
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:

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