IL_8CGN_160
3D structure
- PDB id
- 8CGN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Non-rotated 80S S. cerevisiae ribosome with ligands
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.28 Å
Loop
- Sequence
- GAUUAAG*CGC
- Length
- 10 nucleotides
- Bulged bases
- 8CGN|1|c|A|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CGN_160 not in the Motif Atlas
- Homologous match to IL_4V88_387
- Geometric discrepancy: 0.0774
- The information below is about IL_4V88_387
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_77761.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
8CGN|1|c|G|42
8CGN|1|c|A|43
8CGN|1|c|U|44
8CGN|1|c|U|45
8CGN|1|c|A|46
8CGN|1|c|A|47
8CGN|1|c|G|48
*
8CGN|1|c|C|431
8CGN|1|c|G|432
8CGN|1|c|C|433
Current chains
- Chain c
- 18S ribosomal RNA
Nearby chains
- Chain l
- 40S ribosomal protein S8-B
- Chain z
- 40S ribosomal protein S23-A
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