IL_8CGV_094

3D structure

PDB id

8CGV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tiamulin bound to the 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.66 Å

Loop

Sequence

GAAC*G(PSU)(PSU)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8CGV_094 not in the Motif Atlas

Homologous match to IL_5J7L_343

Geometric discrepancy: 0.0492

The information below is about IL_5J7L_343

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CGV|1|a|G|2588
8CGV|1|a|A|2589
8CGV|1|a|A|2590
8CGV|1|a|C|2591
*
8CGV|1|a|G|2603
8CGV|1|a|PSU|2604
8CGV|1|a|PSU|2605
8CGV|1|a|C|2606

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

Large ribosomal subunit protein uL2